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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915760.1_cds_XP_016465511.1_58457
CDS Infomation

[gene=LOC107788348] [db_xref=GeneID:107788348] [protein=protein CHUP1, chloroplastic-like] [protein_id=XP_016465511.1] [location=complement(join(76493..76975,77604..78443))] [gbkey=CDS]
Sequence

ATGGAAAACAATAGCACAAAGGTGGAAATGATAAAGCCAATATTTCTCAAAGCTGGAATT
CCTATAGCCATAACTTTGGCGGGATATATTATTGCCAAAATCACAACAAAAAGAAGCTCA
ATTTTCATACCTTCAACAAATCAAGAAAATTCTCAAGAAATTATAACCAATCAATATGAT
ATCTCAAGAGATGAAGTTAGCCTTAATCAAAATCTTGATTATTCAGAATATGAAGATGAT
CATTCTTCTACACATACCATTTACAAAGATTCATCAGAAAGTTTTCTTTTTCAAGATAAA
TGCAAATTTGAAGAAGATTTGCTAAGCTTAAGAAGGCAAACGGGCGATATCGAAGAGAGG
GAATTTCAACTAGAGGCCAGATTTCAAAAGTATAGCCACTTGAAAGATCAAGAAATTGCA
CTTATGGACATGCAAAACAAGTTGATATTAGAGATCAATAAAATTGAGTTCTTTGATAAG
GAAATTACACTAATGGAGGGAGAAAACCAAAGATTTCAAAATATGGTAATTGAATATTTG
AGAATTATAGAACTTCTTGATTTGTCACAATCAGAAAATAGATTGCTTCACAAAAAGGTT
AAGAAGCTTTTGAAGAAGATCAAAGAACATTCACAAGTTATAGAGGAACATAACTTTCAA
CTTGAAGCTAAGGAAACAGAAATTTCAAGAAATGAAAAAGGGCTAGAAATGAAAGATCAT
ATTATCAAGAAAATGGAATTAGATATTCAAGAGCTGAAAATGGCTATTGAGAAATTGCAA
GAGGAGAAGACTGAACTACAGAGAAAGCTAGAATTGGGAGAGAATTCAAATCCATCCAAG
AGTAATGTGGAAGTGGTAACAATAGAAGATTACAAAGAATTGGCAAAAGAACTTCAGCAA
CTGGAGAAGGATAAAGCTACTGAAGACAAAGAATTAATATACTTAAGGTGGTGCAATGCA
TGTTTAAGGCATGAATTAATGAGGAGGAATCAAGAACAAATAGAACAAGAGAAAAACCAA
AATCAAGAATTGAATTTGGGAGAAGAAAATACAGAAATTATAACAGAATTTGTACCAAAA
CATGAGTTAATTATGAGGAGGAGTTCATCAGTGGGACACAATGAATCTTGCTTAAGTTCA
CCTATTAATGGAAGTCATTCAAATGATCATTCCAAAAGGAGAAAATTAATACAAAAGTTC
AAGAAATGGGTAGAAGGAAGTGATAAAATGAAACATGAAACTAATTGCTTTAAAAGGCAT
TCTGTTTCTGATTATACTGAAGAATTAATGATTCCTGCTAGAAAGTCATGTTCTAGTGCT
TAA

Peptide Sequence

PEP ID

XP_016465511.1
PEP Infomation

PREDICTED: protein CHUP1, chloroplastic-like [Nicotiana tabacum]
Sequence

MENNSTKVEMIKPIFLKAGIPIAITLAGYIIAKITTKRSSIFIPSTNQENSQEIITNQYD
ISRDEVSLNQNLDYSEYEDDHSSTHTIYKDSSESFLFQDKCKFEEDLLSLRRQTGDIEER
EFQLEARFQKYSHLKDQEIALMDMQNKLILEINKIEFFDKEITLMEGENQRFQNMVIEYL
RIIELLDLSQSENRLLHKKVKKLLKKIKEHSQVIEEHNFQLEAKETEISRNEKGLEMKDH
IIKKMELDIQELKMAIEKLQEEKTELQRKLELGENSNPSKSNVEVVTIEDYKELAKELQQ
LEKDKATEDKELIYLRWCNACLRHELMRRNQEQIEQEKNQNQELNLGEENTEIITEFVPK
HELIMRRSSSVGHNESCLSSPINGSHSNDHSKRRKLIQKFKKWVEGSDKMKHETNCFKRH
SVSDYTEELMIPARKSCSSA

Transcript Sequence

Gene sequence data has not been registered.